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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2466041_2466211_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2466041 - 2466211

Intron Length:

171

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

GCCGTGTCCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

CCCTGCTGAGCC

Flanking Amino Acid:

NEGGLEKLVEYMEKLSHLAF

Intron Amino Acid Position:

394

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

77.7

30.1

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

63.5

0.3

53.1

41.6

Minor 5ss

27.6

-2.6

3.3

39.2

46.2

Minor BPS

43.8

-0.4

2.1

50.45

46.3

Associated Gene:

Gene:

NIBAN2

Ensembl Gene ID:

ENSAPLG00000011287

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023933

2462811 - 2471962

9152

ENSAPLT00000020136

2462811 - 2472156

9346

ENSAPLT00000046971

2462141 - 2472156

10016

ENSAPLT00000011769

2462141 - 2474507

12367

ENSAPLT00000045164

2462141 - 2471962

9822

ENSAPLT00000026810

2462141 - 2472156

10016