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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2467535_2467611_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2467535 - 2467611

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

CCTCCCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCCCAA

U12 Branch Point Sequence:

TGTCCCCCAACG

Flanking Amino Acid:

WDMLCGNQSQILSNLVMEEL

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

77.7

30.1

Major BPS

45.3

-0.2

1.2

35.2

Major PPT

81.9

0.72

0.7

75.9

Minor 5ss

27.6

-2.6

3.3

39.2

46.2

Minor BPS

50.5

-0.1

63.5

43.4

Associated Gene:

Gene:

NIBAN2

Ensembl Gene ID:

ENSAPLG00000011287

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020136

2462811 - 2472156

9346

ENSAPLT00000046971

2462141 - 2472156

10016

ENSAPLT00000011769

2462141 - 2474507

12367

ENSAPLT00000045164

2462141 - 2471962

9822

ENSAPLT00000029396

2463306 - 2472156

8851

ENSAPLT00000023933

2462811 - 2471962

9152