Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_2470493_2470657_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2470493 - 2470657

Intron Length:

165

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTTTGTCGG

5'SS Class:

major

3'SS Sequence:

CTTCCCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAGAG

U12 Branch Point Sequence:

TGCCCCTTCAGA

Flanking Amino Acid:

EQQPAWKHAPGVAPKSGNAA

Intron Amino Acid Position:

193

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.28

1.3

48.3

47.4

Major BPS

50.2

0.01

1.5

54.7

43.1

Major PPT

75.7

0.58

0.7

69.5

24.3

Minor 5ss

35.6

-1.6

2.6

34.1

41.4

Minor BPS

48.9

-0

2.1

61.26

44.7

Associated Gene:

Gene:

NIBAN2

Ensembl Gene ID:

ENSAPLG00000011287

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023933

2462811 - 2471962

9152