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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2470493_2471059_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2470493 - 2471059

Intron Length:

567

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

CTTCCCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAGAG

U12 Branch Point Sequence:

TGCCCCTTCAGA

Flanking Amino Acid:

YLELVSSSLPGVAPKSGNAA

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

64.9

41.1

Major BPS

50.2

0.01

1.5

54.7

43.1

Major PPT

75.7

0.58

0.7

69.5

24.3

Minor 5ss

26.8

-2.7

28.2

38.6

Minor BPS

48.9

-0

2.1

61.26

44.7

Associated Gene:

Gene:

NIBAN2

Ensembl Gene ID:

ENSAPLG00000011287

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011769

2462141 - 2474507

12367

ENSAPLT00000046971

2462141 - 2472156

10016

ENSAPLT00000029396

2463306 - 2472156

8851

ENSAPLT00000026810

2462141 - 2472156

10016

ENSAPLT00000020136

2462811 - 2472156

9346