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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2470672_2471059_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2470672 - 2471059

Intron Length:

388

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

ACCTCCCCGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAG

U12 Branch Point Sequence:

AGAGCCTTGACA

Flanking Amino Acid:

VPGAGEQQPAWKHAPGVAPK

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

64.9

41.1

Major BPS

63.6

0.34

1.5

63.1

44.4

Major PPT

63.6

0.31

58.4

32.4

Minor 5ss

26.8

-2.7

28.2

38.6

Minor BPS

0.44

1.4

66.36

39.7

Associated Gene:

Gene:

NIBAN2

Ensembl Gene ID:

ENSAPLG00000011287

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023933

2462811 - 2471962

9152