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Intron Name: Anas_platyrhynchos_platyrhynchos_18_247131_247721_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

247131 - 247721

Intron Length:

591

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTTCA

5'SS Class:

strong_major

3'SS Sequence:

TTTAATCTGCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTTTTTTAATC

Flanking Amino Acid:

YCSYCLKKIISSGPQKCASC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

1.1

77.7

33.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

68.9

0.43

62.8

43.8

Minor 5ss

-0.4

2.5

59.7

44.7

Minor BPS

77.2

0.83

79.83

28.4

Associated Gene:

Gene:

TRAF2

Ensembl Gene ID:

ENSAPLG00000016230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021928

226574 - 248228

21655

ENSAPLT00000016945

227574 - 248228

20655