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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2516389_2516508_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2516389 - 2516508

Intron Length:

120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTTGA

5'SS Class:

strong_major

3'SS Sequence:

GTGCTTCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCATCAC

U12 Branch Point Sequence:

CCAGCATCACCT

Flanking Amino Acid:

APTPPLSVNGDLGPAEWGMS

Intron Amino Acid Position:

428

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

71.1

37.5

Major BPS

49.2

-0

1.3

53.6

41.6

Major PPT

79.3

0.66

0.9

73.2

37.2

Minor 5ss

32.7

-2

3.1

40.4

45.8

Minor BPS

41.2

-0.5

53.75

47.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024372

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033856

2514060 - 2518910

4851

ENSAPLT00000025515

2514060 - 2518910

4851