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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2516684_2517697_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2516684 - 2517697

Intron Length:

1014

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCCC

5'SS Class:

strong_major

3'SS Sequence:

TGTCCCGGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCCGAG

U12 Branch Point Sequence:

GGTGCCCGAGCC

Flanking Amino Acid:

QATALVQQLQVSLYADPPRA

Intron Amino Acid Position:

370

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

66.5

39.1

Major BPS

-0.8

1.5

25.8

35.7

Major PPT

67.9

0.4

61.5

Minor 5ss

26.6

-2.7

3.1

33.5

41.9

Minor BPS

-0.5

54.11

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024372

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025515

2514060 - 2518910

4851