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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2522855_2523599_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2522855 - 2523599

Intron Length:

745

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGCAG

5'SS Class:

major

3'SS Sequence:

CCTGTCCCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTTAC

U12 Branch Point Sequence:

CCTTGCTTACCC

Flanking Amino Acid:

QPLPRIVTIQRGGSAHNCGK

Intron Amino Acid Position:

973

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.1

60.5

45.8

Major BPS

66.4

0.41

1.1

57.4

41.4

Major PPT

76.5

0.6

0.8

69.5

31.2

Minor 5ss

28.7

-2.4

3.4

37.1

47.5

Minor BPS

0.07

2.1

65.55

46.5

Associated Gene:

Gene:

WHRN

Ensembl Gene ID:

ENSAPLG00000024736

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023034

2522358 - 2573611

51254

ENSAPLT00000018637

2522672 - 2573611

50940