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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2523723_2523948_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2523723 - 2523948

Intron Length:

226

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGGATG

5'SS Class:

major

3'SS Sequence:

TGTCTGCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCCCAG

U12 Branch Point Sequence:

CTCTCGGCAGCC

Flanking Amino Acid:

EAAAEGASKPPGLLEPTSCL

Intron Amino Acid Position:

932

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

69.9

42.1

Major BPS

43.3

-0.4

1.6

52.1

45.2

Major PPT

72.4

0.5

0.9

65.8

Minor 5ss

30.9

-2.2

3.2

40.5

45.5

Minor BPS

36.2

-1

2.6

49.78

46.8

Associated Gene:

Gene:

WHRN

Ensembl Gene ID:

ENSAPLG00000024736

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023034

2522358 - 2573611

51254

ENSAPLT00000018637

2522672 - 2573611

50940