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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2524128_2525436_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2524128 - 2525436

Intron Length:

1309

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTGTC

5'SS Class:

strong_major

3'SS Sequence:

CCCTCTCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGACAT

U12 Branch Point Sequence:

TCCCCCCTGACA

Flanking Amino Acid:

NEVRPLPQARASTLSQLSDS

Intron Amino Acid Position:

872

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

75.7

34.4

Major BPS

55.3

0.13

1.3

64.4

41.8

Major PPT

73.3

0.52

0.8

64.7

30.8

Minor 5ss

30.4

-2.2

3.5

42.4

45.1

Minor BPS

0.15

1.7

64.84

41.4

Associated Gene:

Gene:

WHRN

Ensembl Gene ID:

ENSAPLG00000024736

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023034

2522358 - 2573611

51254

ENSAPLT00000018637

2522672 - 2573611

50940