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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2526035_2526342_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2526035 - 2526342

Intron Length:

308

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGCAC

5'SS Class:

strong_major

3'SS Sequence:

GTTGGTTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGGTGAC

U12 Branch Point Sequence:

AGGCCGGTGACA

Flanking Amino Acid:

SINTLPDISLDDLSSFPEEP

Intron Amino Acid Position:

673

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

65.7

Major BPS

47.5

-0.1

1.3

38.2

41.7

Major PPT

69.8

0.45

1.1

65.2

45.5

Minor 5ss

31.2

-2.2

3.3

38.7

40.9

Minor BPS

40.5

-0.7

2.5

50.63

40.7

Associated Gene:

Gene:

WHRN

Ensembl Gene ID:

ENSAPLG00000024736

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023034

2522358 - 2573611

51254

ENSAPLT00000018637

2522672 - 2573611

50940