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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2526415_2530390_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2526415 - 2530390

Intron Length:

3976

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGGACC

5'SS Class:

strong_major

3'SS Sequence:

TTTGCCTTGTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTGAC

U12 Branch Point Sequence:

GGTGCTGTGACC

Flanking Amino Acid:

RLLWLIDLMENTSEMEGGGD

Intron Amino Acid Position:

660

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

34.7

Major BPS

0.22

1.2

52.4

43.3

Major PPT

77.6

0.62

77.2

Minor 5ss

32.1

-2

3.3

43.2

44.2

Minor BPS

46.9

-0.2

2.1

58.68

40.8

Associated Gene:

Gene:

WHRN

Ensembl Gene ID:

ENSAPLG00000024736

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023034

2522358 - 2573611

51254