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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2530424_2532016_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2530424 - 2532016

Intron Length:

1593

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

CGCACGTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTTGTTTTAATC

Flanking Amino Acid:

FTSTTVSSARERLLWLIDLM

Intron Amino Acid Position:

649

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

76.2

39.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

60.3

0.23

0.9

49.4

39.2

Minor 5ss

38.3

-1.3

45.5

42.6

Minor BPS

64.2

0.42

1.4

68.66

38.1

Associated Gene:

Gene:

WHRN

Ensembl Gene ID:

ENSAPLG00000024736

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023034

2522358 - 2573611

51254