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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2532230_2532556_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2532230 - 2532556

Intron Length:

327

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCCCT

5'SS Class:

strong_major

3'SS Sequence:

CTGCCTGGCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCCAAC

U12 Branch Point Sequence:

CTCTCTTTGGTT

Flanking Amino Acid:

LFELLNTHAKFSLLSEVRGV

Intron Amino Acid Position:

578

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

71.4

40.3

Major BPS

49.8

-0

1.2

34.3

Major PPT

61.3

0.25

52.9

41.5

Minor 5ss

35.1

-1.7

3.1

48.4

47.3

Minor BPS

43.9

-0.4

3.4

69.71

42.6

Associated Gene:

Gene:

WHRN

Ensembl Gene ID:

ENSAPLG00000024736

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023034

2522358 - 2573611

51254

ENSAPLT00000018637

2522672 - 2573611

50940