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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2532770_2533669_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2532770 - 2533669

Intron Length:

900

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCCGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAAGGAT

U12 Branch Point Sequence:

AGTGCCCAAACC

Flanking Amino Acid:

GDHAAEAAARPVFYRGLAGS

Intron Amino Acid Position:

507

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

75.1

35.1

Major BPS

47.3

-0.1

1.3

43.5

39.2

Major PPT

91.5

0.93

0.6

88.6

20.8

Minor 5ss

31.7

-2.1

3.4

46.2

Minor BPS

47.9

-0.1

2.1

62.29

42.8

Associated Gene:

Gene:

WHRN

Ensembl Gene ID:

ENSAPLG00000024736

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023034

2522358 - 2573611

51254

ENSAPLT00000018637

2522672 - 2573611

50940