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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2534229_2544754_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2534229 - 2544754

Intron Length:

10526

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

CCTTACTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTTAC

U12 Branch Point Sequence:

CTGCCCTTACTC

Flanking Amino Acid:

GSEAESTGLKVGDQILEVNG

Intron Amino Acid Position:

427

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.6

0.96

0.8

77.8

Major BPS

56.6

0.16

1.1

48.9

36.2

Major PPT

79.6

0.67

0.8

73.1

31.4

Minor 5ss

30.7

-2.2

3.3

39.5

45.9

Minor BPS

56.7

0.19

1.7

63.22

42.9

Associated Gene:

Gene:

WHRN

Ensembl Gene ID:

ENSAPLG00000024736

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023034

2522358 - 2573611

51254

ENSAPLT00000018637

2522672 - 2573611

50940