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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2544881_2558882_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2544881 - 2558882

Intron Length:

14002

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

TCCTCCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAG

U12 Branch Point Sequence:

CTCTCAGCATCT

Flanking Amino Acid:

QLLQEGDEKKVNLVLNEGKS

Intron Amino Acid Position:

385

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

0.8

83.9

30.3

Major BPS

58.6

0.22

1.5

38.9

Major PPT

82.1

0.72

0.7

76.6

25.4

Minor 5ss

44.3

-0.6

3.1

64.1

47.4

Minor BPS

39.7

-0.7

2.4

60.9

48.4

Associated Gene:

Gene:

WHRN

Ensembl Gene ID:

ENSAPLG00000024736

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023034

2522358 - 2573611

51254

ENSAPLT00000018637

2522672 - 2573611

50940