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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2559099_2572675_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2559099 - 2572675

Intron Length:

13577

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACGCCG

5'SS Class:

major

3'SS Sequence:

GCTTGTCTTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTAAC

U12 Branch Point Sequence:

TGGGCATTAACC

Flanking Amino Acid:

DRATHAEAVKLLKGCKKLNL

Intron Amino Acid Position:

313

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.2

57.9

46.7

Major BPS

69.5

0.49

71.3

30.3

Major PPT

78.9

0.65

0.9

69.2

41.8

Minor 5ss

36.6

-1.5

3.3

48.4

47.3

Minor BPS

60.3

0.3

1.8

68.37

42.8

Associated Gene:

Gene:

WHRN

Ensembl Gene ID:

ENSAPLG00000024736

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023034

2522358 - 2573611

51254

ENSAPLT00000018637

2522672 - 2573611

50940