Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_2615649_2615768_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

2615649 - 2615768

Intron Length:

120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCGAG

5'SS Class:

strong_major

3'SS Sequence:

CTTAAATTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTAAAT

U12 Branch Point Sequence:

GTGCCCTTAAAT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

72.3

39.5

Major BPS

0.5

1.1

76.9

32.8

Major PPT

67.3

0.39

1.1

62.1

43.1

Minor 5ss

35.7

-1.6

3.3

45.9

49.3

Minor BPS

70.4

0.72

1.4

80.08

41.1

Associated Gene:

Gene:

TMEM268

Ensembl Gene ID:

ENSAPLG00000015381

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016039

2615077 - 2628217

13141