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Intron Name: Anas_platyrhynchos_platyrhynchos_18_265127_265267_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

265127 - 265267

Intron Length:

141

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGACAG

5'SS Class:

strong_major

3'SS Sequence:

CACCTCCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTCCAC

U12 Branch Point Sequence:

GTGTCCCCACTC

Flanking Amino Acid:

ATVQADGDWKAIFEVVGAGG

Intron Amino Acid Position:

1124

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

67.7

39.3

Major BPS

54.8

0.12

1.3

66.4

39.9

Major PPT

68.2

0.41

0.8

60.8

Minor 5ss

25.9

-2.8

2.9

29.3

43.4

Minor BPS

44.3

-0.4

2.1

56.06

42.5

Associated Gene:

Gene:

MAMDC4

Ensembl Gene ID:

ENSAPLG00000016046

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016742

261618 - 274458

12841