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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2689367_2694993_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2689367 - 2694993

Intron Length:

5627

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTCCCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTAAC

U12 Branch Point Sequence:

AGTAACCCATCT

Flanking Amino Acid:

HFLKQRAVATVKKQDFASTV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.8

80.5

34.9

Major BPS

57.9

0.2

1.1

59.4

34.8

Major PPT

78.7

0.65

0.8

72.6

32.3

Minor 5ss

-0.7

2.8

55.1

43.4

Minor BPS

39.9

-0.6

2.1

58.82

43.2

Associated Gene:

Gene:

TNFSF15

Ensembl Gene ID:

ENSAPLG00000015357

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016007

2688939 - 2701642

12704