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Intron Name: Anas_platyrhynchos_platyrhynchos_18_269363_270057_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

269363 - 270057

Intron Length:

695

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGCTGG

5'SS Class:

major

3'SS Sequence:

TGCTCCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

CTGTGCTGACCT

Flanking Amino Acid:

VDFNVTESFKVLIKGVARSG

Intron Amino Acid Position:

598

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.54

1.1

56.7

Major BPS

66.3

0.4

1.1

41.8

Major PPT

76.7

0.6

0.8

69.9

30.9

Minor 5ss

36.4

-1.5

3.2

46.4

Minor BPS

47.4

-0.1

2.2

68.2

48.4

Associated Gene:

Gene:

MAMDC4

Ensembl Gene ID:

ENSAPLG00000016046

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016742

261618 - 274458

12841