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Intron Name: Anas_platyrhynchos_platyrhynchos_18_270217_270506_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

270217 - 270506

Intron Length:

290

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAC|GTGAGTCAC

5'SS Class:

major

3'SS Sequence:

TCCCCGGCTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAG

U12 Branch Point Sequence:

GCTTGCTCACCA

Flanking Amino Acid:

SIISSNSSCYLVLYCHLHGS

Intron Amino Acid Position:

545

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.3

68.4

38.7

Major BPS

0.52

1.5

79.6

35.6

Major PPT

67.3

0.39

0.9

38.7

Minor 5ss

30.4

-2.2

2.8

34.8

34.1

Minor BPS

46.3

-0.2

2.2

60.01

45.8

Associated Gene:

Gene:

MAMDC4

Ensembl Gene ID:

ENSAPLG00000016046

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016742

261618 - 274458

12841