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Intron Name: Anas_platyrhynchos_platyrhynchos_18_270602_271158_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

270602 - 271158

Intron Length:

557

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACATGTT

5'SS Class:

major

3'SS Sequence:

GTGTCTCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTCCAT

U12 Branch Point Sequence:

TTGGCTCCATCT

Flanking Amino Acid:

TRDHSTNSAAGYFLHISSAS

Intron Amino Acid Position:

513

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

78.8

35.5

Major BPS

48.8

-0

1.5

60.4

45.8

Major PPT

72.1

0.5

0.9

65.3

36.3

Minor 5ss

36.9

-1.5

3.7

57.9

46.7

Minor BPS

43.3

-0.4

2.1

64.44

46.1

Associated Gene:

Gene:

MAMDC4

Ensembl Gene ID:

ENSAPLG00000016046

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016742

261618 - 274458

12841