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Intron Name: Anas_platyrhynchos_platyrhynchos_18_272022_272143_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

272022 - 272143

Intron Length:

122

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAAGAGT

5'SS Class:

major

3'SS Sequence:

CCTCTTGTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTCAC

U12 Branch Point Sequence:

CAGCCCTCACCT

Flanking Amino Acid:

YTGRITEQFQLTFALTQPPA

Intron Amino Acid Position:

392

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

71.9

39.4

Major BPS

66.1

0.4

1.1

69.1

37.9

Major PPT

81.1

0.7

0.8

75.6

32.8

Minor 5ss

27.9

-2.5

3.2

39.7

45.9

Minor BPS

48.1

-0

1.9

62.89

46.7

Associated Gene:

Gene:

MAMDC4

Ensembl Gene ID:

ENSAPLG00000016046

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016742

261618 - 274458

12841