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Intron Name: Anas_platyrhynchos_platyrhynchos_18_272290_272529_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

272290 - 272529

Intron Length:

240

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTGAGTGCA

5'SS Class:

major

3'SS Sequence:

GGACTCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCCAAA

U12 Branch Point Sequence:

CATCTTGGGACT

Flanking Amino Acid:

IWASYHLSGSRLNQTACPTL

Intron Amino Acid Position:

343

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

65.2

34.5

Major BPS

-0

1.3

56.7

38.7

Major PPT

67.1

0.39

58.8

Minor 5ss

29.7

-2.3

3.1

38.1

40.6

Minor BPS

41.6

-0.5

57.04

39.9

Associated Gene:

Gene:

MAMDC4

Ensembl Gene ID:

ENSAPLG00000016046

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016742

261618 - 274458

12841