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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2734137_2741811_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2734137 - 2741811

Intron Length:

7675

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGACAC

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCTAAC

U12 Branch Point Sequence:

GGTCACCTAACG

Flanking Amino Acid:

TEGITERIRKGNTSEDFLRI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.8

75.1

35.1

Major BPS

63.2

0.33

63.6

30.5

Major PPT

87.3

0.84

0.7

85.6

29.1

Minor 5ss

32.3

-2

3.1

41.7

Minor BPS

48.4

-0.2

1.9

57.09

43.2

Associated Gene:

Gene:

TNFSF8

Ensembl Gene ID:

ENSAPLG00000018893

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037911

2733296 - 2752782

19487

ENSAPLT00000024182

2733296 - 2755007

21712