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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2741858_2750529_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2741858 - 2750529

Intron Length:

8672

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGCAAT

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

GCCCCCAGAATA

Flanking Amino Acid:

TIMVLVIQRTAADPATEGIT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

78.3

37.9

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

88.9

0.88

0.7

81.3

35.7

Minor 5ss

41.5

-0.9

58.5

45.8

Minor BPS

45.9

-0.3

1.7

51.53

Associated Gene:

Gene:

TNFSF8

Ensembl Gene ID:

ENSAPLG00000018893

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037911

2733296 - 2752782

19487

ENSAPLT00000024182

2733296 - 2755007

21712