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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2750835_2751110_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

2750835 - 2751110

Intron Length:

276

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACTGTAC

5'SS Class:

major

3'SS Sequence:

GTTTTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTGAT

U12 Branch Point Sequence:

TTCTTCGTACCA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.1

38.1

Major BPS

64.7

0.36

1.2

55.1

42.1

Major PPT

91.7

0.94

0.7

84.6

Minor 5ss

-1.6

3.4

49.9

46.7

Minor BPS

50.2

2.3

70.02

42.9

Associated Gene:

Gene:

TNFSF8

Ensembl Gene ID:

ENSAPLG00000018893

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024182

2733296 - 2755007

21712

ENSAPLT00000037911

2733296 - 2752782

19487