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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2751327_2752636_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

2751327 - 2752636

Intron Length:

1310

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTATC

5'SS Class:

strong_major

3'SS Sequence:

TGCCTTTGCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTCTAT

U12 Branch Point Sequence:

TTTGGTGTGACC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.4

0.95

0.8

27.8

Major BPS

58.6

0.22

1.4

58.5

47.9

Major PPT

67.2

0.39

0.9

40.2

Minor 5ss

46.4

-0.4

2.5

62.6

42.2

Minor BPS

-0.4

2.4

64.69

42.1

Associated Gene:

Gene:

TNFSF8

Ensembl Gene ID:

ENSAPLG00000018893

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037911

2733296 - 2752782

19487