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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2780140_2780289_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2780140 - 2780289

Intron Length:

150

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTACCACCG

5'SS Class:

major

3'SS Sequence:

GCCCTGCTTCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

TTTGTTTTAACC

Flanking Amino Acid:

KESKESTELLGCTFQTQQVF

Intron Amino Acid Position:

1915

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.6

0.35

1.3

51.1

45.8

Major BPS

89.7

0.98

0.7

89.9

Major PPT

59.7

0.22

1.1

55.4

39.3

Minor 5ss

36.8

-1.5

3.2

49.2

46.5

Minor BPS

75.2

0.77

1.3

81.25

33.5

Associated Gene:

Gene:

TNC

Ensembl Gene ID:

ENSAPLG00000014515

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024496

2780021 - 2828631

48611