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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2780337_2781347_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2780337 - 2781347

Intron Length:

1011

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTAAAGCCT

5'SS Class:

weak_major

3'SS Sequence:

TCGCTCCATCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAC

U12 Branch Point Sequence:

TGTTACTGACCA

Flanking Amino Acid:

FRNLEGRRKRAWEELTKESK

Intron Amino Acid Position:

1899

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.2

0.08

1.4

51.2

45.4

Major BPS

73.6

0.59

0.9

63.3

35.6

Major PPT

0.38

0.9

37.3

Minor 5ss

33.7

-1.9

3.5

43.9

43.7

Minor BPS

0.09

1.9

70.45

41.1

Associated Gene:

Gene:

TNC

Ensembl Gene ID:

ENSAPLG00000014515

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024496

2780021 - 2828631

48611