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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2782098_2783321_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2782098 - 2783321

Intron Length:

1224

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTGA

5'SS Class:

strong_major

3'SS Sequence:

CATCCCTACCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TCATCCCTACCT

Flanking Amino Acid:

LRVDGYSGTAGDSMTYHNGR

Intron Amino Acid Position:

1899

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

38.1

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

62.8

0.29

0.9

54.8

35.1

Minor 5ss

43.2

-0.7

2.9

56.2

47.9

Minor BPS

57.5

0.31

77.53

44.5

Associated Gene:

Gene:

TNC

Ensembl Gene ID:

ENSAPLG00000014515

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025380

2780915 - 2828631

47717

ENSAPLT00000033333

2780606 - 2828631

48026

ENSAPLT00000024496

2780021 - 2828631

48611

ENSAPLT00000031010

2780606 - 2828631

48026

ENSAPLT00000021254

2780606 - 2828631

48026

ENSAPLT00000030644

2780606 - 2828631

48026

ENSAPLT00000042565

2780606 - 2828631

48026

ENSAPLT00000015243

2780049 - 2882214

102166

ENSAPLT00000030445

2780606 - 2828631

48026

ENSAPLT00000035961

2780606 - 2828631

48026