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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2798154_2804595_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2798154 - 2804595

Intron Length:

6442

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTCTT

5'SS Class:

major

3'SS Sequence:

TCTCCTTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAATCAC

U12 Branch Point Sequence:

TTTTCCCCTACT

Flanking Amino Acid:

GQTLTALATTEAEPEVDNLL

Intron Amino Acid Position:

1578

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

76.3

38.9

Major BPS

58.2

0.2

1.1

61.4

34.4

Major PPT

85.2

0.79

0.6

84.3

23.5

Minor 5ss

46.3

-0.4

2.8

67.8

43.1

Minor BPS

56.4

0.28

2.2

85.93

39.7

Associated Gene:

Gene:

TNC

Ensembl Gene ID:

ENSAPLG00000014515

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031010

2780606 - 2828631

48026