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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2798154_2808296_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2798154 - 2808296

Intron Length:

10143

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCTTTT

5'SS Class:

weak_major

3'SS Sequence:

TCTCCTTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAATCAC

U12 Branch Point Sequence:

TTTTCCCCTACT

Flanking Amino Acid:

TKPLSVETATEAEPEVDNLL

Intron Amino Acid Position:

1133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

1.1

80.5

Major BPS

58.2

0.2

1.1

61.4

34.4

Major PPT

85.2

0.79

0.6

84.3

23.5

Minor 5ss

77.1

0.91

1.7

84.6

33.2

Minor BPS

56.4

0.28

2.2

85.93

39.7

Associated Gene:

Gene:

TNC

Ensembl Gene ID:

ENSAPLG00000014515

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033333

2780606 - 2828631

48026