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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2799933_2801984_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2799933 - 2801984

Intron Length:

2052

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCTGCT

5'SS Class:

major

3'SS Sequence:

TCCCTTCTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAC

U12 Branch Point Sequence:

TTTTTTGCACCT

Flanking Amino Acid:

TEPLTAFVMTEAMPPLGNLT

Intron Amino Acid Position:

1225

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.2

69.9

40.9

Major BPS

65.1

0.38

1.4

77.4

37.4

Major PPT

81.7

0.71

0.7

80.5

24.9

Minor 5ss

39.8

-1.1

3.4

59.5

44.9

Minor BPS

46.2

-0.2

2.3

74.97

42.5

Associated Gene:

Gene:

TNC

Ensembl Gene ID:

ENSAPLG00000014515

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024496

2780021 - 2828631

48611