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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2799933_2804595_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2799933 - 2804595

Intron Length:

4663

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTCTT

5'SS Class:

major

3'SS Sequence:

TCCCTTCTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAC

U12 Branch Point Sequence:

TTTTTTGCACCT

Flanking Amino Acid:

GQTLTALATTEAMPPLGNLT

Intron Amino Acid Position:

1315

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

76.3

38.9

Major BPS

65.1

0.38

1.4

77.4

37.4

Major PPT

81.7

0.71

0.7

80.5

24.9

Minor 5ss

46.3

-0.4

2.8

67.8

43.1

Minor BPS

46.2

-0.2

2.3

74.97

42.5

Associated Gene:

Gene:

TNC

Ensembl Gene ID:

ENSAPLG00000014515

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030644

2780606 - 2828631

48026

ENSAPLT00000021254

2780606 - 2828631

48026

ENSAPLT00000015243

2780049 - 2882214

102166

ENSAPLT00000035961

2780606 - 2828631

48026