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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2804869_2818468_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2804869 - 2818468

Intron Length:

13600

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTCCTATAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTCTTCCTATAG

Flanking Amino Acid:

SKPTTVKGSTVEEPLLSKLT

Intron Amino Acid Position:

1042

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.8

81.1

26.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

85.5

0.8

0.6

81.2

24.2

Minor 5ss

29.7

-2.3

2.6

30.1

36.9

Minor BPS

46.3

-0.4

56.73

44.6

Associated Gene:

Gene:

TNC

Ensembl Gene ID:

ENSAPLG00000014515

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024496

2780021 - 2828631

48611