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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2815953_2818468_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2815953 - 2818468

Intron Length:

2516

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCTTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

TATTTCACACTG

Flanking Amino Acid:

SKPTTVKGSTASRSLTLMQA

Intron Amino Acid Position:

1042

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.8

81.1

26.8

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

85.5

0.8

0.7

81.4

30.6

Minor 5ss

29.7

-2.3

2.6

30.1

36.9

Minor BPS

43.9

-0.6

53.28

41.8

Associated Gene:

Gene:

TNC

Ensembl Gene ID:

ENSAPLG00000014515

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021254

2780606 - 2828631

48026

ENSAPLT00000031010

2780606 - 2828631

48026

ENSAPLT00000030445

2780606 - 2828631

48026