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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2828632_2882130_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

2828632 - 2882130

Intron Length:

53499

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTGTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGATCAT

U12 Branch Point Sequence:

ATCTCTTACACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.7

1.08

0.7

85.2

32.2

Major BPS

64.2

0.35

1.2

65.8

Major PPT

81.7

0.71

0.8

80.5

31.5

Minor 5ss

34.4

-1.8

3.3

49.7

46.6

Minor BPS

51.1

0.12

2.1

73.4

44.1

Associated Gene:

Gene:

TNC

Ensembl Gene ID:

ENSAPLG00000014515

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015243

2780049 - 2882214

102166