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Intron Name: Anas_platyrhynchos_platyrhynchos_18_3046233_3172500_F

Intron Information:

Intron Rank:

133373

Intron Class:

major

Intron Phase:

Intron Coordinates:

3046233 - 3172500

Intron Length:

126268

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCCC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTGTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAGCAT

U12 Branch Point Sequence:

TCTTTCTGTACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

71.3

37.2

Major BPS

55.5

0.14

1.4

40.9

Major PPT

84.1

0.77

0.8

79.7

32.4

Minor 5ss

-2.1

3.3

42.6

44.4

Minor BPS

58.1

0.25

1.8

71.49

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021721

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030471

3046077 - 3172529

126453