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Intron Name: Anas_platyrhynchos_platyrhynchos_18_3224011_3249454_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3224011 - 3249454

Intron Length:

25444

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TGGGGGCACATAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TTATTCATATTT

Flanking Amino Acid:

GGQRSPAVIAGLYDKCSYTS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.9

81.8

38.5

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

-0

39.1

39.4

Minor 5ss

36.1

-1.6

3.1

51.1

45.4

Minor BPS

55.2

0.24

1.8

77.34

39.3

Associated Gene:

Gene:

PAPPA

Ensembl Gene ID:

ENSAPLG00000014198

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014795

3223614 - 3389872

166259

ENSAPLT00000028260

3223423 - 3401362

177940