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Intron Name: Anas_platyrhynchos_platyrhynchos_18_3280811_3284858_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3280811 - 3284858

Intron Length:

4048

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTGGG

5'SS Class:

strong_major

3'SS Sequence:

GTTTTAATTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCTGTTTTAATT

Flanking Amino Acid:

TPFSNFMSYADDDCTDSFTP

Intron Amino Acid Position:

595

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

67.3

44.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

80.4

0.68

0.9

71.2

43.2

Minor 5ss

-2.2

3.3

40.6

45.6

Minor BPS

0.64

1.3

78.3

39.3

Associated Gene:

Gene:

PAPPA

Ensembl Gene ID:

ENSAPLG00000014198

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028260

3223423 - 3401362

177940

ENSAPLT00000014795

3223614 - 3389872

166259

ENSAPLT00000034510

3186393 - 3400860

214468