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Intron Name: Anas_platyrhynchos_platyrhynchos_18_3291712_3297096_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3291712 - 3297096

Intron Length:

5385

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTTAT

U12 Branch Point Sequence:

TTATGCACATTC

Flanking Amino Acid:

SGHWSPREAEGHPDVEQPCK

Intron Amino Acid Position:

700

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.6

1.05

0.7

81.4

32.7

Major BPS

0.47

1.2

61.1

45.5

Major PPT

91.6

0.94

0.6

84.4

30.5

Minor 5ss

34.5

-1.8

2.9

43.8

43.9

Minor BPS

41.1

-0.6

2.2

56.46

42.1

Associated Gene:

Gene:

PAPPA

Ensembl Gene ID:

ENSAPLG00000014198

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034510

3186393 - 3400860

214468

ENSAPLT00000028260

3223423 - 3401362

177940

ENSAPLT00000014795

3223614 - 3389872

166259