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Intron Name: Anas_platyrhynchos_platyrhynchos_18_3297605_3314403_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3297605 - 3314403

Intron Length:

16799

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

CCTTGTGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TGTACAATCACT

Flanking Amino Acid:

ISNLSRRFVDTELSDGTTYT

Intron Amino Acid Position:

869

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

1.2

84.4

33.5

Major BPS

0.85

0.9

39.9

Major PPT

78.3

0.64

0.9

Minor 5ss

39.8

-1.1

2.8

52.2

37.4

Minor BPS

46.2

-0.2

2.3

72.22

43.7

Associated Gene:

Gene:

PAPPA

Ensembl Gene ID:

ENSAPLG00000014198

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028260

3223423 - 3401362

177940

ENSAPLT00000014795

3223614 - 3389872

166259

ENSAPLT00000034510

3186393 - 3400860

214468