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Intron Name: Anas_platyrhynchos_platyrhynchos_18_330421_331546_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

330421 - 331546

Intron Length:

1126

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTGGG

5'SS Class:

major

3'SS Sequence:

CTGGTTGAGACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

CTTTGCATATCT

Flanking Amino Acid:

MCGTSLTI*TGLLAPHIFAM

Intron Amino Acid Position:

157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

1.1

67.1

44.6

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

57.7

0.17

1.2

53.3

45.2

Minor 5ss

37.6

-1.4

3.2

49.7

46.6

Minor BPS

49.2

0.02

2.3

76.59

45.8

Associated Gene:

Gene:

RABL6

Ensembl Gene ID:

ENSAPLG00000015770

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016481

301980 - 350891

48912

ENSAPLT00000044263

300033 - 364200

64168

ENSAPLT00000035708

300033 - 359586

59554

ENSAPLT00000022172

301033 - 364200

63168