Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_331688_332555_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

331688 - 332555

Intron Length:

868

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGACAC

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTGGTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAC

U12 Branch Point Sequence:

TCACCCTCACTT

Flanking Amino Acid:

***CLTLPNSGHLIIF*GSF

Intron Amino Acid Position:

110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

0.9

67.8

37.5

Major BPS

72.3

0.55

1.2

77.4

37.4

Major PPT

64.6

0.33

1.2

66.5

38.6

Minor 5ss

32.4

-2

3.1

39.7

40.1

Minor BPS

49.2

0.02

1.8

66.5

44.3

Associated Gene:

Gene:

RABL6

Ensembl Gene ID:

ENSAPLG00000015770

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016481

301980 - 350891

48912

ENSAPLT00000044263

300033 - 364200

64168

ENSAPLT00000035708

300033 - 359586

59554

ENSAPLT00000022172

301033 - 364200

63168