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Intron Name: Anas_platyrhynchos_platyrhynchos_18_3348899_3352848_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3348899 - 3352848

Intron Length:

3950

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGACTA

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTCTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

TTCCTCTGATCT

Flanking Amino Acid:

FDTKEQSHDLGVHVLSCRNN

Intron Amino Acid Position:

1092

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

73.5

37.2

Major BPS

0.72

38.9

Major PPT

0.58

0.9

72.7

Minor 5ss

35.7

-1.6

3.2

45.3

43.7

Minor BPS

53.6

0.19

1.7

73.9

42.8

Associated Gene:

Gene:

PAPPA

Ensembl Gene ID:

ENSAPLG00000014198

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034510

3186393 - 3400860

214468

ENSAPLT00000028260

3223423 - 3401362

177940

ENSAPLT00000014795

3223614 - 3389872

166259