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Intron Name: Anas_platyrhynchos_platyrhynchos_18_3353063_3361871_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3353063 - 3361871

Intron Length:

8809

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCCTG

5'SS Class:

strong_major

3'SS Sequence:

GTCTCTCATCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAAAT

U12 Branch Point Sequence:

TGTCTCTCATCC

Flanking Amino Acid:

RGQTYSPAEQSCVHYSCEAT

Intron Amino Acid Position:

1163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

68.8

43.8

Major BPS

77.3

0.68

81.5

Major PPT

74.6

0.55

0.9

66.1

39.9

Minor 5ss

-1.6

3.2

46.7

48.6

Minor BPS

49.9

-0

1.8

64.82

40.4

Associated Gene:

Gene:

PAPPA

Ensembl Gene ID:

ENSAPLG00000014198

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034510

3186393 - 3400860

214468

ENSAPLT00000028260

3223423 - 3401362

177940

ENSAPLT00000014795

3223614 - 3389872

166259